Saturday, 1 March 2014

OCH 112. INORGANIC CHEMISTRY ----- BY. MWL. JAPHET MASATU.

INORGANIC CHEMISTRY.

Inorganic compounds show rich variety:
A: Diborane features unusual bonding
B: Caesium chloride has an archetypal crystal structure
C: Fp₂ is an organometallic complex
D: Silicone's uses range from breast implants to Silly Putty
E: Grubbs' catalyst won the 2005 Nobel Prize for its discoverer
F: Zeolites find extensive use as molecular sieves
G: Copper(II) acetate surprised theoreticians with its diamagnetism

Inorganic chemistry is the study of the synthesis and behavior of inorganic and organometallic compounds. This field covers all chemical compounds except the myriad organic compounds (carbon based compounds, usually containing C-H bonds), which are the subjects of organic chemistry. The distinction between the two disciplines is far from absolute, and there is much overlap, most importantly in the sub-discipline of organometallic chemistry. It has applications in every aspect of the chemical industry–including catalysis, materials science, pigments, surfactants, coatings, medicine, fuel, and agriculture. ^[1]

Key concepts

The structure of the ionic framework in potassium oxide, K₂O

Many inorganic compounds are ionic compounds, consisting of cations and anions joined by ionic bonding. Examples of salts (which are ionic compounds) are magnesium chloride MgCl₂, which consists of magnesium cations Mg²⁺ and chloride anions Cl⁻; or sodium oxide Na₂O, which consists of sodium cations Na⁺ and oxide anions O²⁻. In any salt, the proportions of the ions are such that the electric charges cancel out, so that the bulk compound is electrically neutral. The ions are described by their oxidation state and their ease of formation can be inferred from the ionization potential (for cations) or from the electron affinity (anions) of the parent elements.
Important classes of inorganic salts are the oxides, the carbonates, the sulfates and the halides. Many inorganic compounds are characterized by high melting points. Inorganic salts typically are poor conductors in the solid state. Other important features include their solubility in water(see: solubility chart) and ease of crystallization. Where some salts (e.g., NaCl) are very soluble in water, others (e.g., SiO₂) are not.
The simplest inorganic reaction is double displacement when in mixing of two salts the ions are swapped without a change in oxidation state. In redox reactions one reactant, the oxidant, lowers its oxidation state and another reactant, the reductant, has its oxidation state increased. The net result is an exchange of electrons. Electron exchange can occur indirectly as well, e.g., in batteries, a key concept in electrochemistry.
When one reactant contains hydrogen atoms, a reaction can take place by exchanging protons in acid-base chemistry. In a more general definition, an acid can be any chemical species capable of binding to electron pairs is called a Lewis acid; conversely any molecule that tends to donate an electron pair is referred to as a Lewis base. As a refinement of acid-base interactions, the HSAB theory takes into account polarizability and size of ions.
Inorganic compounds are found in nature as minerals. Soil may contain iron sulfide as pyrite or calcium sulfate as gypsum. Inorganic compounds are also found multitasking as biomolecules: as electrolytes (sodium chloride), in energy storage (ATP) or in construction (the polyphosphate backbone in DNA).
The first important man-made inorganic compound was ammonium nitrate for soil fertilization through the Haber process. Inorganic compounds are synthesized for use as catalysts such as vanadium(V) oxide and titanium(III) chloride, or as reagents in organic chemistry such as lithium aluminium hydride.
Subdivisions of inorganic chemistry are organometallic chemistry, cluster chemistry and bioinorganic chemistry. These fields are active areas of research in inorganic chemistry, aimed toward new catalysts, superconductors, and therapies.

Industrial inorganic chemistry

Inorganic chemistry is a highly practical area of science. Traditionally, the scale of a nation's economy could be evaluated by their productivity of sulfuric acid. The top 20 inorganic chemicals manufactured in Canada, China, Europe, India, Japan, and the US (2005 data):^[2] aluminium sulfate, ammonia, ammonium nitrate, ammonium sulfate, carbon black, chlorine, hydrochloric acid, hydrogen, hydrogen peroxide, nitric acid, nitrogen, oxygen, phosphoric acid, sodium carbonate, sodium chlorate, sodium hydroxide, sodium silicate, sodium sulfate, sulfuric acid, and titanium dioxide.
The manufacturing of fertilizers is another practical application of industrial inorganic chemistry.

Descriptive inorganic chemistry

Descriptive inorganic chemistry focuses on the classification of compounds based on their properties. Partly the classification focuses on the position in the periodic table of the heaviest element (the element with the highest atomic weight) in the compound, partly by grouping compounds by their structural similarities. When studying inorganic compounds, one often encounters parts of the different classes of inorganic chemistry (an organometallic compound is characterized by its coordination chemistry, and may show interesting solid state properties).
Different classifications are:

Coordination compounds

EDTA chelates an octahedrally coordinated Co³⁺ ion in [Co(EDTA)]⁻

Main article: Coordination chemistry

Classical coordination compounds feature metals bound to "lone pairs" of electrons residing on the main group atoms of ligands such as H₂O, NH₃, Cl⁻, and CN⁻. In modern coordination compounds almost all organic and inorganic compounds can be used as ligands. The "metal" usually is a metal from the groups 3-13, as well as the trans-lanthanides and trans-actinides, but from a certain perspective, all chemical compounds can be described as coordination complexes.
The stereochemistry of coordination complexes can be quite rich, as hinted at by Werner's separation of two enantiomers of [Co((OH)₂Co(NH₃)₄)₃]⁶⁺, an early demonstration that chirality is not inherent to organic compounds. A topical theme within this specialization is supramolecular coordination chemistry.^[3]

Examples: [Co(EDTA)]⁻, [Co(NH₃)₆]³⁺, TiCl₄(THF)₂.

Main group compounds

Tetrasulfur tetranitride, S₄N₄, is a main group compound that continues to intrigue chemists

These species feature elements from groups 1, 2 and 13-18 (excluding hydrogen) of the periodic table. Due to their often similar reactivity, the elements in group 3 (Sc, Y, and La) and group 12 (Zn, Cd, and Hg) are also generally included.^[4]
Main group compounds have been known since the beginnings of chemistry, e.g., elemental sulfur and the distillable white phosphorus. Experiments on oxygen, O₂, by Lavoisier and Priestley not only identified an important diatomic gas, but opened the way for describing compounds and reactions according to stoichiometric ratios. The discovery of a practical synthesis of ammonia using iron catalysts by Carl Bosch and Fritz Haber in the early 1900s deeply impacted mankind, demonstrating the significance of inorganic chemical synthesis. Typical main group compounds are SiO₂, SnCl₄, and N₂O. Many main group compounds can also be classed as “organometallic”, as they contain organic groups, e.g., B(CH₃)₃). Main group compounds also occur in nature, e.g., phosphate in DNA, and therefore may be classed as bioinorganic. Conversely, organic compounds lacking (many) hydrogen ligands can be classed as “inorganic”, such as the fullerenes, buckytubes and binary carbon oxides.

Examples: tetrasulfur tetranitride S₄N₄, diborane B₂H₆, silicones, buckminsterfullerene C₆₀.

Transition metal compounds

Compounds containing metals from group 4 to 11 are considered transition metal compounds. Compounds with a metal from group 3 or 12 are sometimes also incorporated into this group, but also often classified as main group compounds.
Transition metal compounds show a rich coordination chemistry, varying from tetrahedral for titanium (e.g., TiCl₄) to square planar for some nickel complexes to octahedral for coordination complexes of cobalt. A range of transition metals can be found in biologically important compounds, such as iron in hemoglobin.

Examples: iron pentacarbonyl, titanium tetrachloride, cisplatin

Organometallic compounds

Organolithium reagents are most often found in polymeric form, such as n-butyllithium shown here

Main article: Organometallic chemistry

Usually, organometallic compounds are considered to contain the M-C-H group.^[5] The metal (M) in these species can either be a main group element or a transition metal. Operationally, the definition of an organometallic compound is more relaxed to include also highly lipophilic complexes such as metal carbonyls and even metal alkoxides.
Organometallic compounds are mainly considered a special category because organic ligands are often sensitive to hydrolysis or oxidation, necessitating that organometallic chemistry employs more specialized preparative methods than was traditional in Werner-type complexes. Synthetic methodology, especially the ability to manipulate complexes in solvents of low coordinating power, enabled the exploration of very weakly coordinating ligands such as hydrocarbons, H₂, and N₂. Because the ligands are petrochemicals in some sense, the area of organometallic chemistry has greatly benefited from its relevance to industry.

Examples: Cyclopentadienyliron dicarbonyl dimer (C₅H₅)Fe(CO)₂CH₃, Ferrocene Fe(C₅H₅)₂, Molybdenum hexacarbonyl Mo(CO)₆, Diborane B₂H₆, Tetrakis(triphenylphosphine)palladium(0) Pd[P(C₆H₅)₃]₄

Cluster compounds

Decaborane is a powerfully toxic cluster compound of boron

Iron-sulfur clusters are central components of iron-sulfur proteins, essential for human metabolism

Main article: Cluster compound

Clusters can be found in all classes of chemical compounds. According to the commonly accepted definition, a cluster consists minimally of a triangular set of atoms that are directly bonded to each other. But metal-metal bonded dimetallic complexes are highly relevant to the area. Clusters occur in "pure" inorganic systems, organometallic chemistry, main group chemistry, and bioinorganic chemistry. The distinction between very large clusters and bulk solids is increasingly blurred. This interface is the chemical basis of nanoscience or nanotechnology and specifically arise from the study of quantum size effects in cadmium selenide clusters. Thus, large clusters can be described as an array of bound atoms intermediate in character between a molecule and a solid.

Examples: Fe₃(CO)₁₂, B₁₀H₁₄, [Mo₆Cl₁₄]²⁻, 4Fe-4S

Bioinorganic compounds

The octahedral cobalt centre of Vitamin B₁₂

Main article: Bioinorganic chemistry

Solid state compounds

Main article: solid-state chemistry

YBa₂Cu₃O₇, or YBCO, is a high temperature superconductor able to levitate above a magnet when colder than its critical temperature of about 90 K (−183 °C)

This important area focuses on structure,^[7] bonding, and the physical properties of materials. In practice, solid state inorganic chemistry uses techniques such as crystallography to gain an understanding of the properties that result from collective interactions between the subunits of the solid. Included in solid state chemistry are metals and their alloys or intermetallic derivatives. Related fields are condensed matter physics, mineralogy, and materials science.

Examples: silicon chips, zeolites, YBa₂Cu₃O₇

Theoretical inorganic chemistry

An alternative perspective on the area of inorganic chemistry begins with the Bohr model of the atom and, using the tools and models of theoretical chemistry and computational chemistry, expands into bonding in simple and then more complex molecules. Precise quantum mechanical descriptions for multielectron species, the province of inorganic chemistry, is difficult. This challenge has spawned many semi-quantitative or semi-empirical approaches including molecular orbital theory and ligand field theory, In parallel with these theoretical descriptions, approximate methodologies are employed, including density functional theory.
Exceptions to theories, qualitative and quantitative, are extremely important in the development of the field. For example, Cu^II₂(OAc)₄(H₂O)₂ is almost diamagnetic below room temperature whereas Crystal Field Theory predicts that the molecule would have two unpaired electrons. The disagreement between qualitative theory (paramagnetic) and observation (diamagnetic) led to the development of models for "magnetic coupling." These improved models led to the development of new magnetic materials and new technologies.

Qualitative theories

Crystal field theory explains why [Fe^III(CN)₆]³⁻ has only one unpaired electron

Inorganic chemistry has greatly benefited from qualitative theories. Such theories are easier to learn as they require little background in quantum theory. Within main group compounds, VSEPR theory powerfully predicts, or at least rationalizes, the structures of main group compounds, such as an explanation for why NH₃ is pyramidal whereas ClF₃ is T-shaped. For the transition metals, crystal field theory allows one to understand the magnetism of many simple complexes, such as why [Fe^III(CN)₆]³⁻ has only one unpaired electron, whereas [Fe^III(H₂O)₆]³⁺ has five. A particularly powerful qualitative approach to assessing the structure and reactivity begins with classifying molecules according to electron counting, focusing on the numbers of valence electrons, usually at the central atom in a molecule.

Molecular symmetry group theory

Nitrogen dioxide, NO₂, exhibits C_2v symmetry

A central construct in inorganic chemistry is the theory of molecular symmetry.^[8] Mathematical group theory provides the language to describe the shapes of molecules according to their point group symmetry. Group theory also enables factoring and simplification of theoretical calculations.
Spectroscopic features are analyzed and described with respect to the symmetry properties of the, inter alia, vibrational or electronic states. Knowledge of the symmetry properties of the ground and excited states allows one to predict the numbers and intensities of absorptions in vibrational and electronic spectra. A classic application of group theory is the prediction of the number of C-O vibrations in substituted metal carbonyl complexes. The most common applications of symmetry to spectroscopy involve vibrational and electronic spectra.
As an instructional tool, group theory highlights commonalities and differences in the bonding of otherwise disparate species, such as WF₆ and Mo(CO)₆ or CO₂ and NO₂.

Thermodynamics and inorganic chemistry

An alternative quantitative approach to inorganic chemistry focuses on energies of reactions. This approach is highly traditional and empirical, but it is also useful. Broad concepts that are couched in thermodynamic terms include redox potential, acidity, phase changes. A classic concept in inorganic thermodynamics is the Born-Haber cycle, which is used for assessing the energies of elementary processes such as electron affinity, some of which cannot be observed directly.

Mechanistic inorganic chemistry

An important and increasingly popular aspect of inorganic chemistry focuses on reaction pathways. The mechanisms of reactions are discussed differently for different classes of compounds.

Main group elements and lanthanides

The mechanisms of main group compounds of groups 13-18 are usually discussed in the context of organic chemistry (organic compounds are main group compounds, after all). Elements heavier than C, N, O, and F often form compounds with more electrons than predicted by the octet rule, as explained in the article on hypervalent molecules. The mechanisms of their reactions differ from organic compounds for this reason. Elements lighter than carbon (B, Be, Li) as well as Al and Mg often form electron-deficient structures that are electronically akin to carbocations. Such electron-deficient species tend to react via associative pathways. The chemistry of the lanthanides mirrors many aspects of chemistry seen for aluminium.

Transition metal complexes

Mechanisms for the reactions of transition metals are discussed differently from main group compounds.^[9] The important role of d-orbitals in bonding strongly influences the pathways and rates of ligand substitution and dissociation. These themes are covered in articles on coordination chemistry and ligand. Both associative and dissociative pathways are observed.
An overarching aspect of mechanistic transition metal chemistry is the kinetic lability of the complex illustrated by the exchange of free and bound water in the prototypical complexes [M(H₂O)₆]ⁿ⁺:

[M(H₂O)₆]ⁿ⁺ + 6 H₂O* → [M(H₂O*)₆]ⁿ⁺ + 6 H₂O

where H₂O* denotes isotopically enriched water, e.g., H₂¹⁷O

The rates of water exchange varies by 20 orders of magnitude across the periodic table, with lanthanide complexes at one extreme and Ir(III) species being the slowest.

Redox reactions

Redox reactions are prevalent for the transition elements. Two classes of redox reaction are considered: atom-transfer reactions, such as oxidative addition/reductive elimination, and electron-transfer. A fundamental redox reaction is "self-exchange", which involves the degenerate reaction between an oxidant and a reductant. For example, permanganate and its one-electron reduced relative manganate exchange one electron:

[MnO₄]⁻ + [Mn*O₄]²⁻ → [MnO₄]²⁻ + [Mn*O₄]⁻

Reactions at ligands

Coordinated ligands display reactivity distinct from the free ligands. For example, the acidity of the ammonia ligands in [Co(NH₃)₆]³⁺ is elevated relative to NH₃ itself. Alkenes bound to metal cations are reactive toward nucleophiles whereas alkenes normally are not. The large and industrially important area of catalysis hinges on the ability of metals to modify the reactivity of organic ligands. Homogeneous catalysis occurs in solution and heterogeneous catalysis occurs when gaseous or dissolved substrates interact with surfaces of solids. Traditionally homogeneous catalysis is considered part of organometallic chemistry and heterogeneous catalysis is discussed in the context of surface science, a subfield of solid state chemistry. But the basic inorganic chemical principles are the same. Transition metals, almost uniquely, react with small molecules such as CO, H₂, O₂, and C₂H₄. The industrial significance of these feedstocks drives the active area of catalysis. Ligands can also undergo ligand transfer reactions such as transmetalation.

Characterization of inorganic compounds

Because of the diverse range of elements and the correspondingly diverse properties of the resulting derivatives, inorganic chemistry is closely associated with many methods of analysis. Older methods tended to examine bulk properties such as the electrical conductivity of solutions, melting points, solubility, and acidity. With the advent of quantum theory and the corresponding expansion of electronic apparatus, new tools have been introduced to probe the electronic properties of inorganic molecules and solids. Often these measurements provide insights relevant to theoretical models. For example, measurements on the photoelectron spectrum of methane demonstrated that describing the bonding by the two-center, two-electron bonds predicted between the carbon and hydrogen using Valence Bond Theory is not appropriate for describing ionisation processes in a simple way. Such insights led to the popularization of molecular orbital theory as fully delocalised orbitals are a more appropriate simple description of electron removal and electron excitation.
Commonly encountered techniques are:

X-ray crystallography: This technique allows for the 3D determination of molecular structures.
Dual polarisation interferometer: This technique measures the conformation and conformational change of molecules.
Various forms of spectroscopy
- Ultraviolet-visible spectroscopy: Historically, this has been an important tool, since many inorganic compounds are strongly colored
- NMR spectroscopy: Besides ¹H and ¹³C many other "good" NMR nuclei (e.g., ¹¹B, ¹⁹F, ³¹P, and ¹⁹⁵Pt) give important information on compound properties and structure. Also the NMR of paramagnetic species can result in important structural information. Proton NMR is also important because the light hydrogen nucleus is not easily detected by X-ray crystallography.
- Infrared spectroscopy: Mostly for absorptions from carbonyl ligands
- Electron nuclear double resonance (ENDOR) spectroscopy
- Mössbauer spectroscopy
- Electron-spin resonance: ESR (or EPR) allows for the measurement of the environment of paramagnetic metal centres.
Electrochemistry: Cyclic voltammetry and related techniques probe the redox characteristics of compounds.

Synthetic inorganic chemistry

Although some inorganic species can be obtained in pure form from nature, most are synthesized in chemical plants and in the laboratory.
Inorganic synthetic methods can be classified roughly according the volatility or solubility of the component reactants.^[10] Soluble inorganic compounds are prepared using methods of organic synthesis. For metal-containing compounds that are reactive toward air, Schlenk line and glove box techniques are followed. Volatile compounds and gases are manipulated in “vacuum manifolds” consisting of glass piping interconnected through valves, the entirety of which can be evacuated to 0.001 mm Hg or less. Compounds are condensed using liquid nitrogen (b.p. 78K) or other cryogens. Solids are typically prepared using tube furnaces, the reactants and products being sealed in containers, often made of fused silica (amorphous SiO₂) but sometimes more specialized materials such as welded Ta tubes or Pt “boats”. Products and reactants are transported between temperature zones to drive reactions.